Metadata in multi-position datasets

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Metadata in multi-position datasets

David Barry

Hello All,


We’re having some difficulty with the reading of metadata in multi-position datasets from MM2.


Essentially, it appears that, in such datasets, complete metadata is only stored in the first file in the series – is this correct?


This presents problems when attempting to, for example, open individual stacks from the dataset in Huygens, as the metadata in individual TIF stacks is incomplete and Huygens therefore reads and presents the data incorrectly.


Is there any way around this problem?







Dave Barry,

Image Analyst,

Crick Advanced Light Microscopy Facility (CALM),

The Francis Crick Institute,

1 Midland Road,


NW1 1AT.


T: +44 20379 60913

E: [hidden email]


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The Francis Crick Institute Limited is a registered charity in England and Wales no. 1140062 and a company registered in England and Wales no. 06885462, with its registered office at 1 Midland Road London NW1 1AT

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